BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035H11SP1|AL430139
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1719 1746 0.0
>3x_Contig1719
Length = 15804
Score = 1746 bits (881), Expect = 0.0
Identities = 888/889 (99%), Gaps = 1/889 (0%)
Strand = Plus / Minus
Query: 1 gtattttcgtttccaatcctatctgtgatagttaaataagtcaaagacaacacagagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2595 gtattttcgtttccaatcctatctgtgatagttaaataagtcaaagacaacacagagtta 2536
Query: 61 gtcaaccaattagtacaggaaatcatagatccgcccacagctcttcggttcaggggtaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2535 gtcaaccaattagtacaggaaatcatagatccgcccacagctcttcggttcaggggtaaa 2476
Query: 121 aattcgacactgctccacggtactactcccataccagtagcgtaag-accaacataaaca 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2475 aattcgacactgctccacggtactactcccataccagtagcgtaagcaccaacataaaca 2416
Query: 180 atcacagatacaaccaatagcgctaggttattcaattcgaaaccaacagaacataataac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2415 atcacagatacaaccaatagcgctaggttattcaattcgaaaccaacagaacataataac 2356
Query: 240 aaacctactgtcataatccatatagtcatgagtagcaaggttctttttcccatcgtgtca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2355 aaacctactgtcataatccatatagtcatgagtagcaaggttctttttcccatcgtgtca 2296
Query: 300 atcaacttcattgctagtaaggtgaaagaaaaatttgtaaacgcaacgatgattgccgga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2295 atcaacttcattgctagtaaggtgaaagaaaaatttgtaaacgcaacgatgattgccgga 2236
Query: 360 actaaaggattggtaaatcctacttgctcgaaaatcgttgcggaataatacatgaatgcg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2235 actaaaggattggtaaatcctacttgctcgaaaatcgttgcggaataatacatgaatgcg 2176
Query: 420 ttgaagccacttgtctgttgaaaaaacattaacacacagccaatgattaaggctcgttta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2175 ttgaagccacttgtctgttgaaaaaacattaacacacagccaatgattaaggctcgttta 2116
Query: 480 ctttttccctcccatctatgtctttttttacctagttgctcattgtagtacgtagcaccc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2115 ctttttccctcccatctatgtctttttttacctagttgctcattgtagtacgtagcaccc 2056
Query: 540 aaagaagatcttccagttcttgttgatgcaacgcttcttcttttgttcacagggaaaagc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2055 aaagaagatcttccagttcttgttgatgcaacgcttcttcttttgttcacagggaaaagc 1996
Query: 600 aatggatcggtctcatcattatggtatcttagtttattcaaatcactagtcaattttctt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1995 aatggatcggtctcatcattatggtatcttagtttattcaaatcactagtcaattttctt 1936
Query: 660 aacttatgccgtatttcaggaaccgtcgcagcagggtacaccttatgcagtgccaattct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1935 aacttatgccgtatttcaggaaccgtcgcagcagggtacaccttatgcagtgccaattct 1876
Query: 720 gcctccaccagtcttgatttagataataaccatctgggagattctggaataaaatctaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1875 gcctccaccagtcttgatttagataataaccatctgggagattctggaataaaatctaat 1816
Query: 780 gtcaacagaaatacaattgctgggatggatcctagggcgaagagatatcgccaggctgca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1815 gtcaacagaaatacaattgctgggatggatcctagggcgaagagatatcgccaggctgca 1756
Query: 840 gttgattgagggtggtcattgtcaatcatgaaatatgcaatgacatacg 888
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1755 gttgattgagggtggtcattgtcaatcatgaaatatgcaatgacatacg 1707
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6482
Number of Sequences: 1807
Number of extensions: 6482
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)